Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Gm11594-201ENSMUST00000122313 162 ntBASIC18.7■□□□□ 0.58
Slc6a20bO88575 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.7■□□□□ 0.58
Slc6a20bO88575 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Gm6296-201ENSMUST00000222599 943 ntBASIC18.7■□□□□ 0.58
Slc6a20bO88575 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20bO88575 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20bO88575 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Gm7862-201ENSMUST00000121461 292 ntBASIC18.68■□□□□ 0.58
Slc6a20bO88575 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Gm6376-201ENSMUST00000209407 580 ntBASIC18.68■□□□□ 0.58
Slc6a20bO88575 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.68■□□□□ 0.58
Slc6a20bO88575 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20bO88575 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20bO88575 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.67■□□□□ 0.58
Slc6a20bO88575 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slc6a20bO88575 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.66■□□□□ 0.58
Slc6a20bO88575 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Mir5131-201ENSMUST00000175426 93 ntBASIC18.66■□□□□ 0.58
Slc6a20bO88575 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.66■□□□□ 0.58
Slc6a20bO88575 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20bO88575 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Mir8112-201ENSMUST00000184382 131 ntBASIC18.65■□□□□ 0.58
Slc6a20bO88575 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Gm8000-201ENSMUST00000188378 592 ntBASIC18.65■□□□□ 0.58
Slc6a20bO88575 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.65■□□□□ 0.58
Slc6a20bO88575 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.65■□□□□ 0.58
Slc6a20bO88575 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms