Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tnfrsf17O88472 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tnfrsf17O88472 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44357-201ENSMUST00000195897 142 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm19658-201ENSMUST00000196231 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44367-201ENSMUST00000196836 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44350-201ENSMUST00000197197 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44390-201ENSMUST00000197533 144 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44313-201ENSMUST00000198018 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44486-201ENSMUST00000198508 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44454-201ENSMUST00000198541 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44314-201ENSMUST00000199263 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44394-201ENSMUST00000199558 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44484-201ENSMUST00000199873 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44466-201ENSMUST00000200264 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm44359-201ENSMUST00000200671 138 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm5186-201ENSMUST00000218781 920 ntBASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tnfrsf17O88472 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Mir5126-201ENSMUST00000175513 77 ntBASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tnfrsf17O88472 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf17O88472 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf17O88472 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf17O88472 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tnfrsf17O88472 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms