Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr1O70481 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr1O70481 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr1O70481 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Ubr1O70481 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr1O70481 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr1O70481 Gm15372-201ENSMUST00000120729 834 ntBASIC22.27■■□□□ 1.16
Ubr1O70481 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC22.27■■□□□ 1.16
Ubr1O70481 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr1O70481 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Ubr1O70481 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ubr1O70481 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 Tfap2a-209ENSMUST00000225180 1828 ntBASIC22.26■■□□□ 1.15
Ubr1O70481 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ubr1O70481 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC22.26■■□□□ 1.15
Ubr1O70481 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr1O70481 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC22.25■■□□□ 1.15
Ubr1O70481 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC22.25■■□□□ 1.15
Ubr1O70481 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC22.25■■□□□ 1.15
Ubr1O70481 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC22.25■■□□□ 1.15
Ubr1O70481 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ubr1O70481 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Ubr1O70481 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC22.25■■□□□ 1.15
Ubr1O70481 Gm43347-201ENSMUST00000200226 580 ntBASIC22.25■■□□□ 1.15
Ubr1O70481 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr1O70481 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC22.24■■□□□ 1.15
Ubr1O70481 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr1O70481 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr1O70481 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr1O70481 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Ubr1O70481 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr1O70481 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr1O70481 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.24■■□□□ 1.15
Ubr1O70481 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ubr1O70481 Gm28659-201ENSMUST00000188013 759 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44357-201ENSMUST00000195897 142 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm19658-201ENSMUST00000196231 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44367-201ENSMUST00000196836 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44350-201ENSMUST00000197197 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44390-201ENSMUST00000197533 144 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44313-201ENSMUST00000198018 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44486-201ENSMUST00000198508 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44454-201ENSMUST00000198541 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44314-201ENSMUST00000199263 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44394-201ENSMUST00000199558 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44484-201ENSMUST00000199873 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44466-201ENSMUST00000200264 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Gm44359-201ENSMUST00000200671 138 ntBASIC22.23■■□□□ 1.15
Ubr1O70481 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr1O70481 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Ubr1O70481 AC153794.1-201ENSMUST00000169148 126 ntBASIC22.22■■□□□ 1.15
Ubr1O70481 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr1O70481 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr1O70481 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC22.22■■□□□ 1.15
Ubr1O70481 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr1O70481 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr1O70481 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr1O70481 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC22.22■■□□□ 1.15
Ubr1O70481 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr1O70481 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ubr1O70481 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Ubr1O70481 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Ubr1O70481 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
Ubr1O70481 Gm10052-201ENSMUST00000168019 960 ntBASIC22.22■■□□□ 1.15
Ubr1O70481 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ubr1O70481 Gm7729-201ENSMUST00000050143 801 ntBASIC22.22■■□□□ 1.15
Ubr1O70481 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubr1O70481 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubr1O70481 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC22.21■■□□□ 1.15
Ubr1O70481 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubr1O70481 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC22.21■■□□□ 1.15
Ubr1O70481 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ubr1O70481 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Ubr1O70481 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC22.21■■□□□ 1.15
Ubr1O70481 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Ubr1O70481 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms