Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.8□□□□□ -0.36
Rpl35aO55142 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.8□□□□□ -0.36
Rpl35aO55142 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.8□□□□□ -0.36
Rpl35aO55142 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.8□□□□□ -0.36
Rpl35aO55142 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpl35aO55142 Gm30025-201ENSMUST00000218555 728 ntBASIC12.8□□□□□ -0.36
Rpl35aO55142 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rpl35aO55142 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rpl35aO55142 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.8□□□□□ -0.36
Rpl35aO55142 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.79□□□□□ -0.36
Rpl35aO55142 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rpl35aO55142 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl35aO55142 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpl35aO55142 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rpl35aO55142 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Rpl35aO55142 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.78□□□□□ -0.36
Rpl35aO55142 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.78□□□□□ -0.36
Rpl35aO55142 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rpl35aO55142 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl35aO55142 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpl35aO55142 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl35aO55142 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl35aO55142 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl35aO55142 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.77□□□□□ -0.36
Rpl35aO55142 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpl35aO55142 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.77□□□□□ -0.37
Rpl35aO55142 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.77□□□□□ -0.37
Rpl35aO55142 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rpl35aO55142 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms