Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Kcnu1O54982 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Kcnu1O54982 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Kcnu1O54982 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.25■□□□□ 0.51
Kcnu1O54982 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.25■□□□□ 0.51
Kcnu1O54982 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Kcnu1O54982 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.24■□□□□ 0.51
Kcnu1O54982 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.24■□□□□ 0.51
Kcnu1O54982 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.24■□□□□ 0.51
Kcnu1O54982 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Kcnu1O54982 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Kcnu1O54982 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Kcnu1O54982 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.23■□□□□ 0.51
Kcnu1O54982 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Kcnu1O54982 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Kcnu1O54982 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Kcnu1O54982 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Kcnu1O54982 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Gm20760-201ENSMUST00000179197 648 ntBASIC18.22■□□□□ 0.51
Kcnu1O54982 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Kcnu1O54982 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Kcnu1O54982 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Kcnu1O54982 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.21■□□□□ 0.51
Kcnu1O54982 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.21■□□□□ 0.51
Kcnu1O54982 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.21■□□□□ 0.51
Kcnu1O54982 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms