Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 Mir770-201ENSMUST00000103252 94 ntBASIC18.75■□□□□ 0.59
Sptlc1O35704 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC18.75■□□□□ 0.59
Sptlc1O35704 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptlc1O35704 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.75■□□□□ 0.59
Sptlc1O35704 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sptlc1O35704 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sptlc1O35704 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptlc1O35704 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sptlc1O35704 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptlc1O35704 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sptlc1O35704 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.74■□□□□ 0.59
Sptlc1O35704 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.74■□□□□ 0.59
Sptlc1O35704 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptlc1O35704 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptlc1O35704 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sptlc1O35704 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.74■□□□□ 0.59
Sptlc1O35704 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sptlc1O35704 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Sptlc1O35704 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptlc1O35704 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptlc1O35704 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.73■□□□□ 0.59
Sptlc1O35704 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sptlc1O35704 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptlc1O35704 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptlc1O35704 Gm6623-201ENSMUST00000173570 544 ntBASIC18.73■□□□□ 0.59
Sptlc1O35704 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptlc1O35704 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sptlc1O35704 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sptlc1O35704 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sptlc1O35704 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.73■□□□□ 0.59
Sptlc1O35704 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptlc1O35704 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.72■□□□□ 0.59
Sptlc1O35704 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sptlc1O35704 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.72■□□□□ 0.59
Sptlc1O35704 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptlc1O35704 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC18.71■□□□□ 0.59
Sptlc1O35704 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sptlc1O35704 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Gm18669-201ENSMUST00000216049 778 ntBASIC18.71■□□□□ 0.59
Sptlc1O35704 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.71■□□□□ 0.59
Sptlc1O35704 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptlc1O35704 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.7■□□□□ 0.58
Sptlc1O35704 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.7■□□□□ 0.58
Sptlc1O35704 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.7■□□□□ 0.58
Sptlc1O35704 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.7■□□□□ 0.58
Sptlc1O35704 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sptlc1O35704 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sptlc1O35704 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms