Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac1O09106 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac1O09106 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Hdac1O09106 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac1O09106 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac1O09106 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.42■□□□□ 0.86
Hdac1O09106 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Hdac1O09106 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.42■□□□□ 0.86
Hdac1O09106 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.42■□□□□ 0.86
Hdac1O09106 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hdac1O09106 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Hdac1O09106 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac1O09106 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.42■□□□□ 0.86
Hdac1O09106 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.41■□□□□ 0.86
Hdac1O09106 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.41■□□□□ 0.86
Hdac1O09106 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac1O09106 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Hdac1O09106 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Gm18025-201ENSMUST00000221733 862 ntBASIC20.4■□□□□ 0.86
Hdac1O09106 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hdac1O09106 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Hdac1O09106 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac1O09106 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.39■□□□□ 0.86
Hdac1O09106 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac1O09106 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac1O09106 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Hdac1O09106 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.39■□□□□ 0.86
Hdac1O09106 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac1O09106 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hdac1O09106 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 Gm12896-201ENSMUST00000118430 226 ntBASIC20.39■□□□□ 0.85
Hdac1O09106 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.39■□□□□ 0.85
Hdac1O09106 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Hdac1O09106 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hdac1O09106 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hdac1O09106 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.39■□□□□ 0.85
Hdac1O09106 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Hdac1O09106 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Hdac1O09106 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac1O09106 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.38■□□□□ 0.85
Hdac1O09106 Gm4974-201ENSMUST00000209974 875 ntBASIC20.38■□□□□ 0.85
Hdac1O09106 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Hdac1O09106 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac1O09106 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Hdac1O09106 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms