Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trove2O08848 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trove2O08848 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.63■□□□□ 0.41
Trove2O08848 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trove2O08848 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trove2O08848 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.62■□□□□ 0.41
Trove2O08848 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.62■□□□□ 0.41
Trove2O08848 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trove2O08848 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trove2O08848 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.61■□□□□ 0.41
Trove2O08848 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trove2O08848 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trove2O08848 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trove2O08848 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.61■□□□□ 0.41
Trove2O08848 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trove2O08848 Mir5133-201ENSMUST00000174955 77 ntBASIC17.61■□□□□ 0.41
Trove2O08848 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Trove2O08848 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.61■□□□□ 0.41
Trove2O08848 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trove2O08848 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.6■□□□□ 0.41
Trove2O08848 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trove2O08848 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.6■□□□□ 0.41
Trove2O08848 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trove2O08848 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.6■□□□□ 0.41
Trove2O08848 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trove2O08848 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trove2O08848 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.6■□□□□ 0.41
Trove2O08848 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trove2O08848 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Trove2O08848 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.59■□□□□ 0.41
Trove2O08848 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trove2O08848 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trove2O08848 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Trove2O08848 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trove2O08848 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trove2O08848 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.58■□□□□ 0.41
Trove2O08848 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trove2O08848 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.58■□□□□ 0.41
Trove2O08848 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trove2O08848 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trove2O08848 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trove2O08848 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.58■□□□□ 0.4
Trove2O08848 Gm37179-201ENSMUST00000194862 823 ntBASIC17.58■□□□□ 0.4
Trove2O08848 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trove2O08848 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trove2O08848 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trove2O08848 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trove2O08848 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.58■□□□□ 0.4
Trove2O08848 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trove2O08848 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms