Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.34■□□□□ 0.21
ClockO08785 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClockO08785 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.34■□□□□ 0.21
ClockO08785 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.34■□□□□ 0.21
ClockO08785 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClockO08785 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClockO08785 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.34■□□□□ 0.21
ClockO08785 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.34■□□□□ 0.21
ClockO08785 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClockO08785 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClockO08785 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ClockO08785 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClockO08785 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ClockO08785 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
ClockO08785 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ClockO08785 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClockO08785 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.33■□□□□ 0.21
ClockO08785 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClockO08785 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClockO08785 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
ClockO08785 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.33■□□□□ 0.2
ClockO08785 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClockO08785 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ClockO08785 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.32■□□□□ 0.2
ClockO08785 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.32■□□□□ 0.2
ClockO08785 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
ClockO08785 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.32■□□□□ 0.2
ClockO08785 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ClockO08785 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ClockO08785 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ClockO08785 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.32■□□□□ 0.2
ClockO08785 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.32■□□□□ 0.2
ClockO08785 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClockO08785 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ClockO08785 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ClockO08785 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ClockO08785 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ClockO08785 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.31■□□□□ 0.2
ClockO08785 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Gm29791-202ENSMUST00000207888 369 ntBASIC16.31■□□□□ 0.2
ClockO08785 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClockO08785 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.3■□□□□ 0.2
ClockO08785 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Gm13234-201ENSMUST00000120010 747 ntBASIC16.3■□□□□ 0.2
ClockO08785 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.3■□□□□ 0.2
ClockO08785 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.3■□□□□ 0.2
ClockO08785 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ClockO08785 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClockO08785 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ClockO08785 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms