Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Raet1bO08603 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Raet1bO08603 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Raet1bO08603 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1bO08603 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.19■□□□□ 0.02
Raet1bO08603 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.19■□□□□ 0.02
Raet1bO08603 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1bO08603 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1bO08603 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.19■□□□□ 0.02
Raet1bO08603 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Raet1bO08603 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.19■□□□□ 0.02
Raet1bO08603 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.19■□□□□ 0.02
Raet1bO08603 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1bO08603 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1bO08603 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Raet1bO08603 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Raet1bO08603 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1bO08603 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1bO08603 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1bO08603 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1bO08603 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Raet1bO08603 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1bO08603 Gm12085-201ENSMUST00000119263 940 ntBASIC15.18■□□□□ 0.02
Raet1bO08603 Gm22240-201ENSMUST00000175225 82 ntBASIC15.18■□□□□ 0.02
Raet1bO08603 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Raet1bO08603 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.18■□□□□ 0.02
Raet1bO08603 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Raet1bO08603 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1bO08603 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1bO08603 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raet1bO08603 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raet1bO08603 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raet1bO08603 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.17■□□□□ 0.02
Raet1bO08603 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Raet1bO08603 Gm37025-201ENSMUST00000195159 829 ntBASIC15.17■□□□□ 0.02
Raet1bO08603 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.17■□□□□ 0.02
Raet1bO08603 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.17■□□□□ 0.02
Raet1bO08603 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1bO08603 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Raet1bO08603 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.16■□□□□ 0.02
Raet1bO08603 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.16■□□□□ 0.02
Raet1bO08603 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Raet1bO08603 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Raet1bO08603 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Raet1bO08603 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.16■□□□□ 0.02
Raet1bO08603 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1bO08603 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1bO08603 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1bO08603 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms