Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1aO08602 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1aO08602 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Raet1aO08602 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Raet1aO08602 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Raet1aO08602 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.2■□□□□ 0.02
Raet1aO08602 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Raet1aO08602 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Raet1aO08602 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Raet1aO08602 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1aO08602 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.19■□□□□ 0.02
Raet1aO08602 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1aO08602 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1aO08602 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.19■□□□□ 0.02
Raet1aO08602 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Raet1aO08602 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.19■□□□□ 0.02
Raet1aO08602 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.19■□□□□ 0.02
Raet1aO08602 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1aO08602 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1aO08602 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Raet1aO08602 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Raet1aO08602 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Raet1aO08602 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 Gm12085-201ENSMUST00000119263 940 ntBASIC15.18■□□□□ 0.02
Raet1aO08602 Gm22240-201ENSMUST00000175225 82 ntBASIC15.18■□□□□ 0.02
Raet1aO08602 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Raet1aO08602 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.18■□□□□ 0.02
Raet1aO08602 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Raet1aO08602 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1aO08602 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raet1aO08602 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raet1aO08602 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raet1aO08602 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.17■□□□□ 0.02
Raet1aO08602 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Raet1aO08602 Gm37025-201ENSMUST00000195159 829 ntBASIC15.17■□□□□ 0.02
Raet1aO08602 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.17■□□□□ 0.02
Raet1aO08602 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.17■□□□□ 0.02
Raet1aO08602 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Raet1aO08602 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1aO08602 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1aO08602 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1aO08602 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms