Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AlyrefO08583 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.31■□□□□ 0.36
AlyrefO08583 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AlyrefO08583 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AlyrefO08583 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AlyrefO08583 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
AlyrefO08583 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AlyrefO08583 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AlyrefO08583 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AlyrefO08583 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
AlyrefO08583 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.3■□□□□ 0.36
AlyrefO08583 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.3■□□□□ 0.36
AlyrefO08583 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.3■□□□□ 0.36
AlyrefO08583 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AlyrefO08583 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.3■□□□□ 0.36
AlyrefO08583 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AlyrefO08583 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.3■□□□□ 0.36
AlyrefO08583 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.29■□□□□ 0.36
AlyrefO08583 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.29■□□□□ 0.36
AlyrefO08583 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Gm26039-201ENSMUST00000158152 144 ntBASIC17.29■□□□□ 0.36
AlyrefO08583 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.29■□□□□ 0.36
AlyrefO08583 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.29■□□□□ 0.36
AlyrefO08583 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
AlyrefO08583 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.29■□□□□ 0.36
AlyrefO08583 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AlyrefO08583 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AlyrefO08583 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AlyrefO08583 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
AlyrefO08583 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.28■□□□□ 0.36
AlyrefO08583 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
AlyrefO08583 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AlyrefO08583 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AlyrefO08583 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AlyrefO08583 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
AlyrefO08583 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.28■□□□□ 0.36
AlyrefO08583 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AlyrefO08583 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AlyrefO08583 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AlyrefO08583 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AlyrefO08583 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AlyrefO08583 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.27■□□□□ 0.36
AlyrefO08583 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AlyrefO08583 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
AlyrefO08583 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AlyrefO08583 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.27■□□□□ 0.36
AlyrefO08583 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
AlyrefO08583 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AlyrefO08583 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AlyrefO08583 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.27■□□□□ 0.35
AlyrefO08583 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.26■□□□□ 0.35
AlyrefO08583 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.26■□□□□ 0.35
AlyrefO08583 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.26■□□□□ 0.35
AlyrefO08583 Gm26308-201ENSMUST00000157768 69 ntBASIC17.26■□□□□ 0.35
AlyrefO08583 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Gm27321-201ENSMUST00000185021 205 ntBASIC17.26■□□□□ 0.35
AlyrefO08583 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.26■□□□□ 0.35
AlyrefO08583 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms