Protein–RNA interactions for Protein: J9JI28

Vwa3b, von Willebrand factor A domain-containing 3B, mousemouse

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vwa3bJ9JI28 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vwa3bJ9JI28 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vwa3bJ9JI28 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Gm37292-201ENSMUST00000192062 758 ntBASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vwa3bJ9JI28 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vwa3bJ9JI28 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Gm15565-201ENSMUST00000118890 427 ntBASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vwa3bJ9JI28 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vwa3bJ9JI28 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vwa3bJ9JI28 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms