Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm10553J3QPF1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm10553J3QPF1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm10553J3QPF1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm10553J3QPF1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Gm27463-201ENSMUST00000183569 57 ntBASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10553J3QPF1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10553J3QPF1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Gm13559-201ENSMUST00000120476 863 ntBASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Gm37025-201ENSMUST00000195159 829 ntBASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Gm7791-201ENSMUST00000219066 539 ntBASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10553J3QPF1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms