Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Gm7291-201ENSMUST00000199147 382 ntBASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa8J3QNX5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shisa8J3QNX5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Shisa8J3QNX5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Shisa8J3QNX5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa8J3QNX5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa8J3QNX5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa8J3QNX5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Shisa8J3QNX5 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.63■□□□□ 0.09
Shisa8J3QNX5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa8J3QNX5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa8J3QNX5 Gm2399-201ENSMUST00000104944 225 ntBASIC15.63■□□□□ 0.09
Shisa8J3QNX5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms