Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Gm17661-201ENSMUST00000170317 270 ntBASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Timm23-208ENSMUST00000226683 750 ntBASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-3J3QMG8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-3J3QMG8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Gm7638-201ENSMUST00000121348 967 ntBASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-3J3QMG8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav13d-3J3QMG8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-3J3QMG8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms