Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim55G3X8Y1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim55G3X8Y1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim55G3X8Y1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim55G3X8Y1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim55G3X8Y1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim55G3X8Y1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms