Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Gm11643-201ENSMUST00000119578 864 ntBASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Gm26524-201ENSMUST00000192339 390 ntBASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh1F7BJK1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Dancr-204ENSMUST00000132389 2347 ntBASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.43■□□□□ 0.06
Pcdh1F7BJK1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Mtag2-201ENSMUST00000058665 714 ntBASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh1F7BJK1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms