Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc188F6WEU2 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Mir3113-201ENSMUST00000175478 76 ntBASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Gm6550-201ENSMUST00000187574 993 ntBASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Gm10355-201ENSMUST00000097146 517 ntBASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc188F6WEU2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc188F6WEU2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc188F6WEU2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc188F6WEU2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc188F6WEU2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc188F6WEU2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc188F6WEU2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Gm20949-201ENSMUST00000206478 952 ntBASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc188F6WEU2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms