Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Gm10566-201ENSMUST00000086739 996 ntBASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb9E9Q5G2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Gm6659-201ENSMUST00000174752 547 ntBASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Actl10-202ENSMUST00000226583 1501 ntBASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb9E9Q5G2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Gm10013-201ENSMUST00000106074 672 ntBASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb9E9Q5G2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Gm18101-201ENSMUST00000215769 548 ntBASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb9E9Q5G2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb9E9Q5G2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.14■□□□□ 0.82
Pcdhb9E9Q5G2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb9E9Q5G2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms