Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Gm20049-201ENSMUST00000219950 730 ntBASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28043E0CXC2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.22■□□□□ 0.35
Gm28043E0CXC2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Gm12896-201ENSMUST00000118430 226 ntBASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28043E0CXC2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Gm11927-201ENSMUST00000118472 759 ntBASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28043E0CXC2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28043E0CXC2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms