Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm38285-201ENSMUST00000192928 922 ntBASIC19.69■□□□□ 0.74
Syce3B5KM66 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.69■□□□□ 0.74
Syce3B5KM66 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Syce3B5KM66 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.68■□□□□ 0.74
Syce3B5KM66 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.68■□□□□ 0.74
Syce3B5KM66 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Syce3B5KM66 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syce3B5KM66 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Syce3B5KM66 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.67■□□□□ 0.74
Syce3B5KM66 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Syce3B5KM66 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Syce3B5KM66 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syce3B5KM66 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.66■□□□□ 0.74
Syce3B5KM66 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.66■□□□□ 0.74
Syce3B5KM66 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Syce3B5KM66 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.66■□□□□ 0.74
Syce3B5KM66 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Syce3B5KM66 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syce3B5KM66 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Syce3B5KM66 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.65■□□□□ 0.74
Syce3B5KM66 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Syce3B5KM66 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.65■□□□□ 0.74
Syce3B5KM66 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.65■□□□□ 0.74
Syce3B5KM66 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Syce3B5KM66 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Syce3B5KM66 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.65■□□□□ 0.74
Syce3B5KM66 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syce3B5KM66 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Syce3B5KM66 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.64■□□□□ 0.74
Syce3B5KM66 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Syce3B5KM66 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Syce3B5KM66 Gm10418-201ENSMUST00000100943 576 ntBASIC19.64■□□□□ 0.73
Syce3B5KM66 Gm13401-201ENSMUST00000117074 291 ntBASIC19.64■□□□□ 0.73
Syce3B5KM66 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.64■□□□□ 0.73
Syce3B5KM66 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.64■□□□□ 0.73
Syce3B5KM66 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms