Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Gm10013-201ENSMUST00000106074 672 ntBASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Gm8969-201ENSMUST00000199694 526 ntBASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usf3B2RUQ2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usf3B2RUQ2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usf3B2RUQ2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usf3B2RUQ2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Gm17971-201ENSMUST00000190239 806 ntBASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usf3B2RUQ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Usf3B2RUQ2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms