Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.96□□□□□ -0.33
Col6a5A6H584 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a5A6H584 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a5A6H584 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Col6a5A6H584 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a5A6H584 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Mir7023-201ENSMUST00000185093 64 ntBASIC12.95□□□□□ -0.34
Col6a5A6H584 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a5A6H584 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a5A6H584 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.95□□□□□ -0.34
Col6a5A6H584 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.95□□□□□ -0.34
Col6a5A6H584 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col6a5A6H584 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a5A6H584 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a5A6H584 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a5A6H584 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.94□□□□□ -0.34
Col6a5A6H584 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col6a5A6H584 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a5A6H584 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a5A6H584 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a5A6H584 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a5A6H584 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a5A6H584 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a5A6H584 Grk6-206ENSMUST00000224995 2971 ntBASIC12.94□□□□□ -0.34
Col6a5A6H584 Gm25990-201ENSMUST00000102440 86 ntBASIC12.93□□□□□ -0.34
Col6a5A6H584 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a5A6H584 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Gm13616-201ENSMUST00000120600 222 ntBASIC12.93□□□□□ -0.34
Col6a5A6H584 Gm27628-201ENSMUST00000184911 107 ntBASIC12.93□□□□□ -0.34
Col6a5A6H584 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.93□□□□□ -0.34
Col6a5A6H584 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a5A6H584 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a5A6H584 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.92□□□□□ -0.34
Col6a5A6H584 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a5A6H584 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col6a5A6H584 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col6a5A6H584 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a5A6H584 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Col6a5A6H584 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a5A6H584 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.92□□□□□ -0.34
Col6a5A6H584 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms