Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm4974-201ENSMUST00000209974 875 ntBASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm8520-201ENSMUST00000186517 868 ntBASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lnp1A0A1B0GSK3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.27□□□□□ -0.12
Lnp1A0A1B0GSK3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lnp1A0A1B0GSK3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lnp1A0A1B0GSK3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lnp1A0A1B0GSK3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lnp1A0A1B0GSK3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Mir1199-201ENSMUST00000117015 119 ntBASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lnp1A0A1B0GSK3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.26□□□□□ -0.13
Lnp1A0A1B0GSK3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms