Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Gm12382-201ENSMUST00000122005 922 ntBASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Gm6576-201ENSMUST00000169678 883 ntBASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Gm22240-201ENSMUST00000175225 82 ntBASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv17A0A140T8P8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trbv17A0A140T8P8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Trbv17A0A140T8P8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trbv17A0A140T8P8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trbv17A0A140T8P8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Gm43183-201ENSMUST00000200632 547 ntBASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trbv17A0A140T8P8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trbv17A0A140T8P8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms