Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-5A0A140T8M6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm10418-201ENSMUST00000100943 576 ntBASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm18284-201ENSMUST00000172604 624 ntBASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm7291-201ENSMUST00000199147 382 ntBASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv3-5A0A140T8M6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm45605-201ENSMUST00000210265 4269 ntBASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv3-5A0A140T8M6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv3-5A0A140T8M6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms