Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Gm25016-201ENSMUST00000158399 131 ntBASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cfap99A0A140LIX9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cfap99A0A140LIX9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.48■□□□□ 0.87
Cfap99A0A140LIX9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cfap99A0A140LIX9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Gm16061-201ENSMUST00000122167 857 ntBASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap99A0A140LIX9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cfap99A0A140LIX9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms