Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Gm13148-201ENSMUST00000118892 745 ntBASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Mtag2-201ENSMUST00000058665 714 ntBASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-1A0A0G2JEV5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Rab3c-203ENSMUST00000224180 967 ntBASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-1A0A0G2JEV5 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-1A0A0G2JEV5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7-1A0A0G2JEV5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7-1A0A0G2JEV5 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.21□□□□□ -0.3
Trav7-1A0A0G2JEV5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7-1A0A0G2JEV5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Gm13216-201ENSMUST00000117145 591 ntBASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav7-1A0A0G2JEV5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms