Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm30025-201ENSMUST00000218555 728 ntBASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tgds-204ENSMUST00000228543 1594 ntBASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm10418-201ENSMUST00000100943 576 ntBASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm11643-201ENSMUST00000119578 864 ntBASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Odf3b-204ENSMUST00000227834 930 ntBASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Gm10517-202ENSMUST00000192970 758 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms