Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm43183-201ENSMUST00000200632 547 ntBASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm42545-201ENSMUST00000202755 922 ntBASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.77□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Mir6349-201ENSMUST00000184059 97 ntBASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm12382-201ENSMUST00000122005 922 ntBASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Mir5122-201ENSMUST00000175004 89 ntBASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms