Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv26A0A0B4J1P5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv26A0A0B4J1P5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv26A0A0B4J1P5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv26A0A0B4J1P5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv26A0A0B4J1P5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Mir6982-201ENSMUST00000184354 68 ntBASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Mir8112-201ENSMUST00000184382 131 ntBASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm37055-201ENSMUST00000191866 133 ntBASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm5417-201ENSMUST00000079706 384 ntBASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv26A0A0B4J1P5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm24841-201ENSMUST00000158676 357 ntBASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm8969-201ENSMUST00000199694 526 ntBASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv26A0A0B4J1P5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Odf3b-204ENSMUST00000227834 930 ntBASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv26A0A0B4J1P5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv26A0A0B4J1P5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trbv26A0A0B4J1P5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv26A0A0B4J1P5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv26A0A0B4J1P5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms