Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Igkv5-43A0A0B4J1J2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm11355-201ENSMUST00000121120 306 ntBASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm9013-201ENSMUST00000132939 882 ntBASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm25016-201ENSMUST00000158399 131 ntBASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm37722-201ENSMUST00000193757 208 ntBASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Igkv5-43A0A0B4J1J2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms