Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Mir7075-201ENSMUST00000184187 82 ntBASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv5A0A0B4J1G9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv5A0A0B4J1G9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv5A0A0B4J1G9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms