Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm6623-201ENSMUST00000173570 544 ntBASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.84■□□□□ 0.13
Ighv1-42A0A0A6YY38 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-42A0A0A6YY38 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Gm27000-201ENSMUST00000182943 842 ntBASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-42A0A0A6YY38 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Mir770-201ENSMUST00000103252 94 ntBASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-42A0A0A6YY38 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-42A0A0A6YY38 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-42A0A0A6YY38 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-42A0A0A6YY38 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-42A0A0A6YY38 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-42A0A0A6YY38 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-42A0A0A6YY38 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-42A0A0A6YY38 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms