Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm30025-201ENSMUST00000218555 728 ntBASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Il3ra-202ENSMUST00000223589 738 ntBASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms