Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.77■□□□□ 0.11
Trbc1A0A0A6YWV4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbc1A0A0A6YWV4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbc1A0A0A6YWV4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm3375-201ENSMUST00000203929 796 ntBASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm5417-201ENSMUST00000079706 384 ntBASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbc1A0A0A6YWV4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Mir8112-201ENSMUST00000184382 131 ntBASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms