Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28557A0A087WQQ0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Gm26571-201ENSMUST00000181399 666 ntBASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm28557A0A087WQQ0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm28557A0A087WQQ0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Gm13148-201ENSMUST00000118892 745 ntBASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Gm26524-201ENSMUST00000192339 390 ntBASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28557A0A087WQQ0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28557A0A087WQQ0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms