Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-5A0A075B6B9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-5A0A075B6B9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6d-5A0A075B6B9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms