Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-7A0A075B6B0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-7A0A075B6B0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-7A0A075B6B0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav6d-7A0A075B6B0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-7A0A075B6B0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm5643-201ENSMUST00000117081 966 ntBASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm13158-201ENSMUST00000122007 736 ntBASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-7A0A075B6B0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm11249-201ENSMUST00000117071 859 ntBASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-7A0A075B6B0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms