Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm6576-201ENSMUST00000169678 883 ntBASIC14.08□□□□□ -0.16
Trav18A0A075B656 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.08□□□□□ -0.16
Trav18A0A075B656 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Gm11249-201ENSMUST00000117071 859 ntBASIC14.07□□□□□ -0.16
Trav18A0A075B656 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav18A0A075B656 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.07□□□□□ -0.16
Trav18A0A075B656 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.07□□□□□ -0.16
Trav18A0A075B656 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav18A0A075B656 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.06□□□□□ -0.16
Trav18A0A075B656 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav18A0A075B656 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav18A0A075B656 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Gm10602-201ENSMUST00000098239 609 ntBASIC14.05□□□□□ -0.16
Trav18A0A075B656 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.05□□□□□ -0.16
Trav18A0A075B656 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav18A0A075B656 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.04□□□□□ -0.16
Trav18A0A075B656 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms