Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-4A0A075B654 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Gm13238-201ENSMUST00000117655 780 ntBASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Gm37805-201ENSMUST00000192612 1094 ntBASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Prob1-201ENSMUST00000097619 3021 ntBASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3-4A0A075B654 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3-4A0A075B654 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3-4A0A075B654 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-4A0A075B654 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-4A0A075B654 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-4A0A075B654 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-4A0A075B654 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms