Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16nA0A075B634 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16nA0A075B634 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16nA0A075B634 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16nA0A075B634 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16nA0A075B634 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.01□□□□□ -0.33
Trav16nA0A075B634 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav16nA0A075B634 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav16nA0A075B634 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Gm37812-201ENSMUST00000195216 2475 ntBASIC13□□□□□ -0.33
Trav16nA0A075B634 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav16nA0A075B634 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13□□□□□ -0.33
Trav16nA0A075B634 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Gm42778-201ENSMUST00000199644 553 ntBASIC13□□□□□ -0.33
Trav16nA0A075B634 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13□□□□□ -0.33
Trav16nA0A075B634 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13□□□□□ -0.33
Trav16nA0A075B634 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Hivep3-201ENSMUST00000084306 2973 ntBASIC13□□□□□ -0.33
Trav16nA0A075B634 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13□□□□□ -0.33
Trav16nA0A075B634 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16nA0A075B634 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16nA0A075B634 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms