Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Mir2861-201ENSMUST00000175539 82 ntBASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Mtag2-201ENSMUST00000058665 714 ntBASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Gm4968-201ENSMUST00000071458 858 ntBASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9n-4A0A075B631 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Mir8112-201ENSMUST00000184382 131 ntBASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Gm2559-201ENSMUST00000201323 363 ntBASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9n-4A0A075B631 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-4A0A075B631 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms