Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Gm11249-201ENSMUST00000117071 859 ntBASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Gm15375-201ENSMUST00000119510 849 ntBASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Mir6349-201ENSMUST00000184059 97 ntBASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9-1A0A075B601 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Gm27275-201ENSMUST00000184318 272 ntBASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9-1A0A075B601 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trav9-1A0A075B601 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav9-1A0A075B601 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Gm15039-201ENSMUST00000118914 875 ntBASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Gm6576-201ENSMUST00000169678 883 ntBASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-1A0A075B601 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-1A0A075B601 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-1A0A075B601 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-1A0A075B601 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-1A0A075B601 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms