Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav1A0A075B5Z4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav1A0A075B5Z4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav1A0A075B5Z4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav1A0A075B5Z4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms