Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.56□□□□□ -0.24
Ighv1-55A0A075B5W6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-55A0A075B5W6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv1-55A0A075B5W6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm38027-201ENSMUST00000192315 235 ntBASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.54□□□□□ -0.24
Ighv1-55A0A075B5W6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm17661-201ENSMUST00000170317 270 ntBASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-55A0A075B5W6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.52□□□□□ -0.24
Ighv1-55A0A075B5W6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-55A0A075B5W6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-55A0A075B5W6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms