Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv4A0A075B5I2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv4A0A075B5I2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Gm27011-201ENSMUST00000182352 972 ntBASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv4A0A075B5I2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv4A0A075B5I2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Timm23-208ENSMUST00000226683 750 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms