Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm44208-201ENSMUST00000205199 421 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm45815-201ENSMUST00000220241 146 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm3086-202ENSMUST00000221248 310 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm10343-201ENSMUST00000096279 348 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
Trim56Q80VI1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
Trim56Q80VI1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm4736-201ENSMUST00000100870 380 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Snord72-201ENSMUST00000104549 81 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm14282-201ENSMUST00000119484 240 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm15037-201ENSMUST00000120358 259 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm15212-201ENSMUST00000122403 466 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm22204-201ENSMUST00000122654 327 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm22816-201ENSMUST00000157450 117 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm25637-201ENSMUST00000157529 107 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm22859-201ENSMUST00000174978 122 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Mir6346-201ENSMUST00000183982 81 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Mir6345-201ENSMUST00000184286 128 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm8242-202ENSMUST00000193056 475 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm37300-201ENSMUST00000193327 280 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm7449-201ENSMUST00000194393 663 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm42925-201ENSMUST00000197359 285 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm7468-201ENSMUST00000203900 652 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm45498-201ENSMUST00000210346 283 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm5265-201ENSMUST00000076828 342 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Mir370-201ENSMUST00000083499 79 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.77□□□□□ -1.65
Trim56Q80VI1 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim56Q80VI1 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm22758-201ENSMUST00000102275 96 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Mir676-201ENSMUST00000102443 89 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm16242-201ENSMUST00000117741 334 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm12647-201ENSMUST00000118977 265 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm13273-201ENSMUST00000119737 159 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm5958-201ENSMUST00000147698 297 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm22789-201ENSMUST00000157884 130 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm23545-201ENSMUST00000158205 104 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Mir5098-201ENSMUST00000175320 82 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm7958-201ENSMUST00000178255 468 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm7950-201ENSMUST00000179633 468 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm27997-201ENSMUST00000184942 69 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm28267-201ENSMUST00000191093 265 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm23678-201ENSMUST00000083157 107 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm23461-201ENSMUST00000083265 107 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.76□□□□□ -1.65
Trim56Q80VI1 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim56Q80VI1 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Mir687-201ENSMUST00000102166 89 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm14296-202ENSMUST00000108931 750 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm11600-201ENSMUST00000119592 240 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm11645-201ENSMUST00000121589 649 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm25106-201ENSMUST00000122672 134 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.75□□□□□ -1.65
Trim56Q80VI1 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm20534-201ENSMUST00000172957 172 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm22120-201ENSMUST00000175590 70 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm24863-201ENSMUST00000179499 107 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms