Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Col11a1Q61245 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm15108-201ENSMUST00000116160 803 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm11483-201ENSMUST00000119839 247 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm12383-201ENSMUST00000120628 760 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm7350-201ENSMUST00000120964 636 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm14623-201ENSMUST00000121398 603 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm15111-201ENSMUST00000122142 878 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm24002-201ENSMUST00000158456 104 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm24546-201ENSMUST00000158652 102 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Col11a1Q61245 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm36997-201ENSMUST00000195090 707 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm43115-201ENSMUST00000196244 160 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm24319-201ENSMUST00000083389 107 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm10794-201ENSMUST00000099624 207 ntBASIC1.81□□□□□ -2.12
Col11a1Q61245 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col11a1Q61245 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm12392-201ENSMUST00000118014 938 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm12507-201ENSMUST00000119155 415 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm22225-201ENSMUST00000157358 278 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm24572-201ENSMUST00000175505 88 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC1.8□□□□□ -2.12
Col11a1Q61245 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm37817-201ENSMUST00000195276 434 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm35931-201ENSMUST00000203931 448 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm44665-201ENSMUST00000205381 251 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm44656-201ENSMUST00000208428 490 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.8□□□□□ -2.12
Col11a1Q61245 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col11a1Q61245 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Col11a1Q61245 Mir343-201ENSMUST00000102360 75 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm16359-201ENSMUST00000124511 289 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm15274-201ENSMUST00000131442 291 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm21979-201ENSMUST00000139887 291 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm15259-201ENSMUST00000151262 291 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm23587-201ENSMUST00000157658 84 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm2855-201ENSMUST00000166765 456 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm5967-201ENSMUST00000172723 494 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm18415-201ENSMUST00000177464 647 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm37417-201ENSMUST00000195257 454 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm44137-201ENSMUST00000203670 367 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 AC122901.2-201ENSMUST00000216926 285 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.8□□□□□ -2.12
Col11a1Q61245 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.8□□□□□ -2.12
Col11a1Q61245 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col11a1Q61245 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm12448-201ENSMUST00000118852 655 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm15279-201ENSMUST00000155593 288 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm15508-201ENSMUST00000160330 325 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm22646-201ENSMUST00000175130 115 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm37098-201ENSMUST00000192290 244 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm19244-201ENSMUST00000204340 253 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm18645-202ENSMUST00000212222 760 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm7530-201ENSMUST00000218466 605 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.79□□□□□ -2.12
Col11a1Q61245 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col11a1Q61245 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col11a1Q61245 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col11a1Q61245 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col11a1Q61245 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col11a1Q61245 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.78□□□□□ -2.12
Col11a1Q61245 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.78□□□□□ -2.12
Col11a1Q61245 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
Col11a1Q61245 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.78□□□□□ -2.12
Col11a1Q61245 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.78□□□□□ -2.12
Col11a1Q61245 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col11a1Q61245 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.78□□□□□ -2.12
Col11a1Q61245 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col11a1Q61245 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Col11a1Q61245 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.78□□□□□ -2.12
Col11a1Q61245 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
Col11a1Q61245 Gm10780-201ENSMUST00000099459 285 ntBASIC1.78□□□□□ -2.12
Col11a1Q61245 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.78□□□□□ -2.12
Col11a1Q61245 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
Col11a1Q61245 Gm7123-201ENSMUST00000117647 213 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Anp32-ps-201ENSMUST00000118265 388 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Gm13366-201ENSMUST00000122198 970 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col11a1Q61245 Atp2b4-208ENSMUST00000167348 243 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Gm25525-201ENSMUST00000177701 107 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Gm26178-201ENSMUST00000177706 107 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Col11a1Q61245 Gm26465-201ENSMUST00000178517 107 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Gm25021-201ENSMUST00000179184 107 ntBASIC1.77□□□□□ -2.13
Col11a1Q61245 Gm22995-201ENSMUST00000179670 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms